142 lines
4.6 KiB
Python
142 lines
4.6 KiB
Python
# These tests are auto-generated with test data from:
|
|
# https://github.com/exercism/problem-specifications/tree/main/exercises/protein-translation/canonical-data.json
|
|
# File last updated on 2024-07-08
|
|
|
|
import unittest
|
|
|
|
from protein_translation import (
|
|
proteins,
|
|
)
|
|
|
|
|
|
class ProteinTranslationTest(unittest.TestCase):
|
|
def test_methionine_rna_sequence(self):
|
|
value = "AUG"
|
|
expected = ["Methionine"]
|
|
self.assertEqual(proteins(value), expected)
|
|
|
|
def test_phenylalanine_rna_sequence_1(self):
|
|
value = "UUU"
|
|
expected = ["Phenylalanine"]
|
|
self.assertEqual(proteins(value), expected)
|
|
|
|
def test_phenylalanine_rna_sequence_2(self):
|
|
value = "UUC"
|
|
expected = ["Phenylalanine"]
|
|
self.assertEqual(proteins(value), expected)
|
|
|
|
def test_leucine_rna_sequence_1(self):
|
|
value = "UUA"
|
|
expected = ["Leucine"]
|
|
self.assertEqual(proteins(value), expected)
|
|
|
|
def test_leucine_rna_sequence_2(self):
|
|
value = "UUG"
|
|
expected = ["Leucine"]
|
|
self.assertEqual(proteins(value), expected)
|
|
|
|
def test_serine_rna_sequence_1(self):
|
|
value = "UCU"
|
|
expected = ["Serine"]
|
|
self.assertEqual(proteins(value), expected)
|
|
|
|
def test_serine_rna_sequence_2(self):
|
|
value = "UCC"
|
|
expected = ["Serine"]
|
|
self.assertEqual(proteins(value), expected)
|
|
|
|
def test_serine_rna_sequence_3(self):
|
|
value = "UCA"
|
|
expected = ["Serine"]
|
|
self.assertEqual(proteins(value), expected)
|
|
|
|
def test_serine_rna_sequence_4(self):
|
|
value = "UCG"
|
|
expected = ["Serine"]
|
|
self.assertEqual(proteins(value), expected)
|
|
|
|
def test_tyrosine_rna_sequence_1(self):
|
|
value = "UAU"
|
|
expected = ["Tyrosine"]
|
|
self.assertEqual(proteins(value), expected)
|
|
|
|
def test_tyrosine_rna_sequence_2(self):
|
|
value = "UAC"
|
|
expected = ["Tyrosine"]
|
|
self.assertEqual(proteins(value), expected)
|
|
|
|
def test_cysteine_rna_sequence_1(self):
|
|
value = "UGU"
|
|
expected = ["Cysteine"]
|
|
self.assertEqual(proteins(value), expected)
|
|
|
|
def test_cysteine_rna_sequence_2(self):
|
|
value = "UGC"
|
|
expected = ["Cysteine"]
|
|
self.assertEqual(proteins(value), expected)
|
|
|
|
def test_tryptophan_rna_sequence(self):
|
|
value = "UGG"
|
|
expected = ["Tryptophan"]
|
|
self.assertEqual(proteins(value), expected)
|
|
|
|
def test_stop_codon_rna_sequence_1(self):
|
|
value = "UAA"
|
|
expected = []
|
|
self.assertEqual(proteins(value), expected)
|
|
|
|
def test_stop_codon_rna_sequence_2(self):
|
|
value = "UAG"
|
|
expected = []
|
|
self.assertEqual(proteins(value), expected)
|
|
|
|
def test_stop_codon_rna_sequence_3(self):
|
|
value = "UGA"
|
|
expected = []
|
|
self.assertEqual(proteins(value), expected)
|
|
|
|
def test_sequence_of_two_protein_codons_translates_into_proteins(self):
|
|
value = "UUUUUU"
|
|
expected = ["Phenylalanine", "Phenylalanine"]
|
|
self.assertEqual(proteins(value), expected)
|
|
|
|
def test_sequence_of_two_different_protein_codons_translates_into_proteins(self):
|
|
value = "UUAUUG"
|
|
expected = ["Leucine", "Leucine"]
|
|
self.assertEqual(proteins(value), expected)
|
|
|
|
def test_translate_rna_strand_into_correct_protein_list(self):
|
|
value = "AUGUUUUGG"
|
|
expected = ["Methionine", "Phenylalanine", "Tryptophan"]
|
|
self.assertEqual(proteins(value), expected)
|
|
|
|
def test_translation_stops_if_stop_codon_at_beginning_of_sequence(self):
|
|
value = "UAGUGG"
|
|
expected = []
|
|
self.assertEqual(proteins(value), expected)
|
|
|
|
def test_translation_stops_if_stop_codon_at_end_of_two_codon_sequence(self):
|
|
value = "UGGUAG"
|
|
expected = ["Tryptophan"]
|
|
self.assertEqual(proteins(value), expected)
|
|
|
|
def test_translation_stops_if_stop_codon_at_end_of_three_codon_sequence(self):
|
|
value = "AUGUUUUAA"
|
|
expected = ["Methionine", "Phenylalanine"]
|
|
self.assertEqual(proteins(value), expected)
|
|
|
|
def test_translation_stops_if_stop_codon_in_middle_of_three_codon_sequence(self):
|
|
value = "UGGUAGUGG"
|
|
expected = ["Tryptophan"]
|
|
self.assertEqual(proteins(value), expected)
|
|
|
|
def test_translation_stops_if_stop_codon_in_middle_of_six_codon_sequence(self):
|
|
value = "UGGUGUUAUUAAUGGUUU"
|
|
expected = ["Tryptophan", "Cysteine", "Tyrosine"]
|
|
self.assertEqual(proteins(value), expected)
|
|
|
|
def test_sequence_of_two_non_stop_codons_does_not_translate_to_a_stop_codon(self):
|
|
value = "AUGAUG"
|
|
expected = ["Methionine", "Methionine"]
|
|
self.assertEqual(proteins(value), expected)
|